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Contents:

  • Getting Started
  • Filtering Genotype Data with NRemover2
  • Encoding Genotype Data
  • Population Genetic Analysis
  • Allele Summary Statistics
  • MultiQC Report Generation
  • Tree Parsing and Phylogenetic Analysis (Experimental)
  • References
  • Example Script
  • Changelog

API Reference:

  • API Reference
  • snpio.io package
  • snpio.filtering
  • snpio.popgenstats package
  • snpio.analysis
  • snpio.plotting package
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© Copyright 2023, Bradley T. Martin and Tyler K. Chafin.

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